supraHex 1.13.3

Human embryo gene expression dataset from Fang et al. (2010)

Description

Human embryo dataset contains gene expression levels (5441 genes and 18 embryo samples) from Fang et al. (2010).

Usage

data(Fang)

Value

  • Fang: a gene expression matrix of 5441 genes x 18 samples, involving six successive stages, each with three replicates.
  • Fang.sampleinfo: a matrix containing the information of the 18 samples for the expression matrix Fang. The three columns correspond to the sample information: "Name", "Stage" and "Replicate".
  • Fang.geneinfo: a matrix containing the information of the 5441 genes for the expression matrix Fang. The three columns correspond to the gene information: "AffyID", "EntrezGene" and "Symbol".

References

Fang et al. (2010). Transcriptome analysis of early organogenesis in human embryos. Developmental Cell, 19(1):174-84.